Remove debug print statements from tests and replace them with assertions (#210)

* remove debug print statements from tests and replace them with assertions, adjust ruff config to flag prints in package code

* remove unused script docs/_static/get_module_graph_dot_file.py

* replace assert statements with ValueError in multiple files

* fix self-documenting f-string unsupported in torchscript

* replace logging.info with print in autobatching.py

* don't ruff ignore INP001 implicit-namespace-package

* codecov unignore torch_sim/unbatched

* primitive_neighbor_list raise RuntimeError not AssertionError on no atoms provided

Author: janosh

.pre-commit-config.yaml

@@ -7,7 +7,7 @@ default_install_hook_types: [pre-commit, commit-msg]
 
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.11.12
+    rev: v0.11.13
     hooks:
       - id: ruff
         args: [--fix]

codecov.yml

@@ -1,5 +1,3 @@
-ignore: [torch_sim/unbatched]
-
 comment: false
 
 coverage: